BMRB Entry 15068
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR15068
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Title: Structure-Activity Analysis of Quorum-Sensing Signaling Peptides from Streptococcus mutans PubMed: 16936029
Deposition date: 2006-12-06 Original release date: 2007-02-01
Authors: Syvitski, R.; Jakeman, D.; Li, Y.
Citation: Syvitski, Raymond; Tian, Xiao-Lin; Sampara, Kamal; Salman, Alan; Lee, Song; Jakeman, David; Li, Yung-Hua. "Structure-Activity Analysis of Quorum-Sensing Signaling Peptides from Streptococcus mutans" J. Bacteriol. 189, 1441-1450 (2007).
Assembly members:
signaling_peptide_UA159sp, polymer, 22 residues, Formula weight is not available
Natural source: Common Name: Streptococcus mutans Taxonomy ID: 1309 Superkingdom: Bacteria Kingdom: not available Genus/species: Streptococcus mutans
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
signaling_peptide_UA159sp: SGSLSTFFRLFNRSFTQALG
KX
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 130 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | UA159 | 1 |
Entities:
Entity 1, UA159 22 residues - Formula weight is not available
| 1 | SER | GLY | SER | LEU | SER | THR | PHE | PHE | ARG | LEU | ||||
| 2 | PHE | ASN | ARG | SER | PHE | THR | GLN | ALA | LEU | GLY | ||||
| 3 | LYS | NH2 |
Samples:
sample: signaling peptide UA159sp, none, 2 mM; TFE, none, 100%
sample_conditions_1: pressure: 1 atm; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 150ms TOCSY | sample | isotropic | sample_conditions_1 |
| 250ms NOESY | sample | isotropic | sample_conditions_1 |
| DOSY | sample | isotropic | sample_conditions_1 |
Software:
X-PLOR v3.1, Brunger A.T. et al. - refinement
xwinnmr v2.6, Bruker - collection
SPARKY v3.1, UCSF - data analysis
NMR spectrometers:
- Bruker AVANCE 500 MHz
Related Database Links:
| PDB | |
| DBJ | BAH87262 BAL68595 |
| EMBL | CAL29378 CAL29379 CAL29380 CAL29381 CAL29382 |
| GB | AAK01541 AAK01542 AAK01543 AAK01545 AAK01546 |
| REF | NP_722220 WP_002267610 WP_002270250 WP_002273928 WP_002278269 |