BMRB Entry 15069
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR15069
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Title: Structure-Activity Analysis of Synthetic Quorum-Sensing Signal Peptides from Streptococcus mutans
Deposition date: 2006-12-06 Original release date: 2008-07-17
Authors: Syvitski, R.; Jakeman, D.; Li, Y.
Citation: Syvitski, R.; Tian, X.; Sampara, K.; Salman, A.; Lee, S.; Jakeman, D.; Li, Y.. "Structure-Activity Analysis of Quorum-Sensing Signaling Peptides from Streptococcus mutans" J. Bacteriol. ., .-..
Assembly members:
signaling_peptide_TCP3, polymer, 19 residues, Formula weight is not available
Natural source: Common Name: Streptococcus mutans Taxonomy ID: 1309 Superkingdom: Bacteria Kingdom: not available Genus/species: Streptococcus mutans
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
signaling_peptide_TCP3: SGTLSTFFRLFNRSFTQAX
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 111 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | TCP3 | 1 |
Entities:
Entity 1, TCP3 19 residues - Formula weight is not available
| 1 | SER | GLY | THR | LEU | SER | THR | PHE | PHE | ARG | LEU | ||||
| 2 | PHE | ASN | ARG | SER | PHE | THR | GLN | ALA | NH2 |
Samples:
sample_1: signaling peptide TCP3, none, 2 mM; TFE, none, 100%
sample_conditions_1: pressure: 1 atm; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 150ms TOCSY | sample_1 | isotropic | sample_conditions_1 |
| 250ms NOESY | sample_1 | isotropic | sample_conditions_1 |
| DOSY | sample_1 | isotropic | sample_conditions_1 |
Software:
X-PLOR v3.1, Brunger A.T. et al. - refinement
xwinnmr v2.6, Bruker - collection
SPARKY v3.1, T Goddard - data analysis
NMR spectrometers:
- Bruker AVANCE 500 MHz