BMRB Entry 15937
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR15937
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Title: Solution structure of the equine infectious anemia virus p9 gag protein PubMed: 20015412
Deposition date: 2008-09-02 Original release date: 2010-01-22
Authors: Sharma, Alok; Bruns, Karsten; Roeder, Rene; Henklein, Peter; Votteler, Joerg; Wray, Victor; Sharma, Ulrich
Citation: Sharma, Alok; Bruns, Karsten; Roeder, Rene; Henklein, Peter; Votteler, Joerg; Wray, Victor; Schubert, Ulrich. "Solution structure of the equine infectious anemia virus p9 protein: a rationalization of its different ALIX binding requirements compared to the analogous HIV-p6 protein." BMC Struct. Biol. 9, 74-74 (2009).
Assembly members:
p9_(22-51), polymer, 30 residues, Formula weight is not available
Natural source: Common Name: HIV-1 Taxonomy ID: 11676 Superkingdom: Viruses Kingdom: not available Genus/species: Lentivirus Human immunodeficiency virus 1
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
p9_(22-51): LYPDLSEIKKEYNVKEKDQV
EDLNLDSLWE
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 242 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | p9 (22-51) | 1 |
Entities:
Entity 1, p9 (22-51) 30 residues - Formula weight is not available
| 1 | LEU | TYR | PRO | ASP | LEU | SER | GLU | ILE | LYS | LYS | |
| 2 | GLU | TYR | ASN | VAL | LYS | GLU | LYS | ASP | GLN | VAL | |
| 3 | GLU | ASP | LEU | ASN | LEU | ASP | SER | LEU | TRP | GLU |
Samples:
sample_1: p9 (22-51) 2-3 mM
sample_conditions_1: pH: 3; pressure: 1 atm; temperature: 300 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-1H TOCSY | sample_1 | isotropic | sample_conditions_1 |
| 2D 1H-1H NOESY | sample_1 | isotropic | sample_conditions_1 |
Software:
AURELIA, Neidig, Geyer, Gorler, Antz, Saffrich, Beneicke, Kalbitzer - chemical shift assignment
NMR spectrometers:
- Bruker DMX 600 MHz