BMRB Entry 16426
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR16426
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Title: NMR-derived structure of residues 29-138 of murine Ets-1, containing the PNT domain, along with phosphorylated Thr38 and Ser41 PubMed: 19002654
Deposition date: 2009-07-27 Original release date: 2009-12-18
Authors: Kang, Hyun-Seo; Lee, Gregory; Nelson, Mary; Graves, Barbara; Blaszczak, Adam; McIntosh, Lawrence
Citation: McIntosh, Lawrence; Kang, Hyun-Seo; Okon, Mark; Nelson, Mary; Graves, Barbara; Brutscher, Bernhard. "Detection and assignment of phosphoserine and phosphothreonine residues by (13)C- (31)P spin-echo difference NMR spectroscopy." J. Biomol. NMR 43, 31-37 (2009).
Assembly members:
murine Ets-1, polymer, 113 residues, Formula weight is not available
Natural source: Common Name: Mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
murine Ets-1: GSHMECADVPLLXPSXKEMM
SQALKATFSGFTKEQQRLGI
PKDPRQWTETHVRDWVMWAV
NEFSLKGVDFQKFCMSGAAL
CALGKECFLELAPDFVGDIL
WEHLEILQKEDVK
- assigned_chemical_shifts
- heteronucl_NOEs
- heteronucl_T1_relaxation
- heteronucl_T2_relaxation
| Data type | Count |
| 13C chemical shifts | 503 |
| 15N chemical shifts | 119 |
| 1H chemical shifts | 797 |
| heteronuclear NOE values | 103 |
| T1 relaxation values | 103 |
| T2 relaxation values | 103 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | murine Ets-1 | 1 |
Entities:
Entity 1, murine Ets-1 113 residues - Formula weight is not available
| 1 | GLY | SER | HIS | MET | GLU | CYS | ALA | ASP | VAL | PRO | ||||
| 2 | LEU | LEU | TPO | PRO | SER | SEP | LYS | GLU | MET | MET | ||||
| 3 | SER | GLN | ALA | LEU | LYS | ALA | THR | PHE | SER | GLY | ||||
| 4 | PHE | THR | LYS | GLU | GLN | GLN | ARG | LEU | GLY | ILE | ||||
| 5 | PRO | LYS | ASP | PRO | ARG | GLN | TRP | THR | GLU | THR | ||||
| 6 | HIS | VAL | ARG | ASP | TRP | VAL | MET | TRP | ALA | VAL | ||||
| 7 | ASN | GLU | PHE | SER | LEU | LYS | GLY | VAL | ASP | PHE | ||||
| 8 | GLN | LYS | PHE | CYS | MET | SER | GLY | ALA | ALA | LEU | ||||
| 9 | CYS | ALA | LEU | GLY | LYS | GLU | CYS | PHE | LEU | GLU | ||||
| 10 | LEU | ALA | PRO | ASP | PHE | VAL | GLY | ASP | ILE | LEU | ||||
| 11 | TRP | GLU | HIS | LEU | GLU | ILE | LEU | GLN | LYS | GLU | ||||
| 12 | ASP | VAL | LYS |
Samples:
sample_1: 2P-ETS1PNT, [U-100% 13C; U-100% 15N], 1 mM; H2O 90%; D2O 10%
sample_conditions_1: ionic strength: 20 mM; pH: 6.5; pressure: 1 atm; temperature: 303 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
| 2D 1H-13C HSQC | sample_1 | isotropic | sample_conditions_1 |
| 3D HNCACB | sample_1 | isotropic | sample_conditions_1 |
| 3D HCCH-TOCSY | sample_1 | isotropic | sample_conditions_1 |
| 3D 1H-15N NOESY | sample_1 | isotropic | sample_conditions_1 |
| 3D 1H-15N TOCSY | sample_1 | isotropic | sample_conditions_1 |
| 3D 1H-13C NOESY | sample_1 | isotropic | sample_conditions_1 |
| 3D CBCA(CO)NH | sample_1 | isotropic | sample_conditions_1 |
| IPAP | sample_1 | isotropic | sample_conditions_1 |
| CLEANEX | sample_1 | isotropic | sample_conditions_1 |
| T1_T2_HNNOE | sample_1 | isotropic | sample_conditions_1 |
| HNCOCA_HACA | sample_1 | isotropic | sample_conditions_1 |
Software:
CYANA, Guntert, Mumenthaler and Wuthrich - structure solution
SCULPTOR, (SCULPTOR)-Martin Blackledge - refinement
SPARKY, Goddard - chemical shift assignment
NMRDraw, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing
Molmol, Koradi, Billeter and Wuthrich - data analysis
ProcheckNMR, Laskowski and MacArthur - data analysis
VNMR, Varian - collection
TALOS, Cornilescu, Delaglio and Bax - data analysis
NMR spectrometers:
- Varian INOVA 600 MHz
Related Database Links:
| BMRB | 4205 |
| PDB | |
| DBJ | BAE40197 |
| EMBL | CAA37904 |
| GB | AAA21093 AAA63299 AAH10588 AAH13089 AAI01928 |
| REF | NP_001033731 NP_035938 NP_036687 XP_003500343 XP_005347065 |
| SP | P27577 P41156 |
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts