BMRB Entry 16442

Name: Solution structure of At3g03773.1 protein from Arabidopsis thaliana
Published: 2010-09-03

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PDB ID: 2kmw
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR16442
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: Solution structure of At3g03773.1 protein from Arabidopsis thaliana

Deposition date: 2009-08-05 Original release date: 2010-09-03

Authors: Sahu, Sarata; Singh, Shanteri; Tonelli, Marco; Markley, John

Citation: Sahu, Sarata; Singh, Shanteri; Tonelli, Marco; Markley, John. "Solution structure of At3g03773.1 protein from Arabidopsis thaliana" Structure ., .-..

Assembly members:
At3g03773.1, polymer, 150 residues, 17342.326 Da.

Natural source: Common Name: Thale cress Taxonomy ID: 3702 Superkingdom: Eukaryota Kingdom: Viridiplantae Genus/species: Arabidopsis thaliana

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):
At3g03773.1: SSRNPEVLWAQRSDKVYLTV ALPDAKDISVKCEPQGLFSF SALGAQGERFEFSLELYGKI MTEYRKNVGLRNIIFSIQKE ERSWWTRLLKSEEKPAPYIK VDWNKWCDEDEEVNSETASD DESAFVNQDSESSDDDGLLY LPDLEKARNK

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	536
15N chemical shifts	140
1H chemical shifts	1052

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	At3g03773.1	1

Entities:

Entity 1, At3g03773.1 150 residues - 17342.326 Da.

1	SER	SER	ARG	ASN	PRO	GLU	VAL	LEU	TRP	ALA
2	GLN	ARG	SER	ASP	LYS	VAL	TYR	LEU	THR	VAL
3	ALA	LEU	PRO	ASP	ALA	LYS	ASP	ILE	SER	VAL
4	LYS	CYS	GLU	PRO	GLN	GLY	LEU	PHE	SER	PHE
5	SER	ALA	LEU	GLY	ALA	GLN	GLY	GLU	ARG	PHE
6	GLU	PHE	SER	LEU	GLU	LEU	TYR	GLY	LYS	ILE
7	MET	THR	GLU	TYR	ARG	LYS	ASN	VAL	GLY	LEU
8	ARG	ASN	ILE	ILE	PHE	SER	ILE	GLN	LYS	GLU
9	GLU	ARG	SER	TRP	TRP	THR	ARG	LEU	LEU	LYS
10	SER	GLU	GLU	LYS	PRO	ALA	PRO	TYR	ILE	LYS
11	VAL	ASP	TRP	ASN	LYS	TRP	CYS	ASP	GLU	ASP
12	GLU	GLU	VAL	ASN	SER	GLU	THR	ALA	SER	ASP
13	ASP	GLU	SER	ALA	PHE	VAL	ASN	GLN	ASP	SER
14	GLU	SER	SER	ASP	ASP	ASP	GLY	LEU	LEU	TYR
15	LEU	PRO	ASP	LEU	GLU	LYS	ALA	ARG	ASN	LYS

Samples:

sample_1: entity, [U-13C; U-15N], 1 ± 0.1 mM; H2O 93%; H2O 7%

sample_conditions_1: ionic strength: 0.1 M; pH: 7.0; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_1	isotropic	sample_conditions_1

Software:

NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

CYANA, Guntert, Mumenthaler and Wuthrich - structure solution

XEASY, Bartels et al. - chemical shift assignment

CNS, Brunger, Adams, Clore, Gros, Nilges and Read - refinement

NMR spectrometers:

Varian INOVA 600 MHz

PDB	2KMW
GB	AAT41786 AAT68743 AAT68744 AAT70471 AAX55169
REF	NP_001154589 NP_683525
SP	Q6ID70

Biological Magnetic Resonance Data Bank