BMRB Entry 17438
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR17438
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Title: LAK160-P7 PubMed: 22869378
Deposition date: 2011-02-01 Original release date: 2012-01-30
Authors: Vermeer, Louic; Bui, Tam; Lan, Yun; Jumagulova, Elmira; Kozlowska, Justyna; McIntyre, Caitlin; Drake, Alex; Mason, James
Citation: Vermeer, Louic; Lan, Yun; Abbate, Vincenzo; Ruh, Emrah; Bui, Tam; Wilkinson, Louise; Kanno, Tokuwa; Jumagulova, Elmira; Kozlowska, Justyna; Patel, Jayneil; McIntyre, Caitlin; Yam, W.; Siu, Gilman; Atkinson, R.; Lam, Jenny; Bansal, Sukhvinder; Drake, Alex; Mitchell, Graham; Mason, A.. "Conformational flexibility determines selectivity and antibacterial, antiplasmodial, and anticancer potency of cationic alpha-helical peptides" J. Biol. Chem. 287, 34120-34133 (2012).
Assembly members:
LAK160-P7, polymer, 24 residues, 2666.540 Da.
Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available
Experimental source: Production method: obtained from a vendor
Entity Sequences (FASTA):
LAK160-P7: KKLKLAPAKLALLWKALALK
LKKA
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 49 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | LAK160-P7 | 1 |
Entities:
Entity 1, LAK160-P7 24 residues - 2666.540 Da.
| 1 | LYS | LYS | LEU | LYS | LEU | ALA | PRO | ALA | LYS | LEU | ||||
| 2 | ALA | LEU | LEU | TRP | LYS | ALA | LEU | ALA | LEU | LYS | ||||
| 3 | LEU | LYS | LYS | ALA |
Samples:
sample_1: LAK160-P7 1 mM; SDS 100 mM; TRIS 5 mM; H2O 90%; D2O 10%
sample_conditions: ionic strength: 100 mM; pH: 7; pressure: 1 atm; temperature: 310 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-1H TOCSY | sample_1 | isotropic | sample_conditions |
| 2D 1H-1H NOESY | sample_1 | isotropic | sample_conditions |
Software:
SPARKY v3.113, Goddard - chemical shift assignment, peak picking
ARIA v2.2, Linge, O, . - refinement, structure solution
TOPSPIN v3.0, Bruker Biospin - collection, processing
ProcheckNMR v3.5.4, Laskowski and MacArthur - data analysis
AQUA v3.2, Rullmann, Doreleijers and Kaptein - data analysis
CNSSOLVE v1.21, Brunger, Adams, Clore, Gros, Nilges and Read - structure solution
Python v2.6.5, Python Software Foundation - data analysis
NMR spectrometers:
- Bruker Avance 500 MHz
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| PDB |