BMRB Entry 19400
Click here to enlarge.
PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR19400
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
NMR-STAR v2.1 text file (deprecated)
XML gzip file.
RDF gzip file.
All files associated with the entry
Title: The structure of the Box CD enzyme reveals regulation of rRNA methylation PubMed: 24121435
Deposition date: 2013-07-31 Original release date: 2013-10-08
Authors: Lapinaite, Audrone; Simon, B.; Skjaerven, L.; Rakwalska-bange, M.; Gabel, F.; Carlomagno, T.
Citation: Lapinaite, Audrone; Simon, Bernd; Skjaerven, Lars; Rakwalska-Bange, Magdalena; Gabel, Frank; Carlomagno, Teresa. "The structure of the box C/D enzyme reveals regulation of RNA methylation." Nature 502, 519-523 (2013).
Assembly members:
SSR26, polymer, 72 residues, 23589.23362 Da.
NOP5-NOP56_RELATED_PROTEIN, polymer, 366 residues, 42138.6332 Da.
50S_RIBOSOMAL_PROTEIN_L7AE, polymer, 121 residues, 13175.4847 Da.
FIBRILLARIN-LIKE_RRNA-TRNA_2'-O-METHYLTRANSFERASE, polymer, 227 residues, 25762.6891 Da.
5'-R(*UP*CP*GP*CP*CP*CP*AP*UP*CP*AP*CP)-3', polymer, 11 residues, 3466.08516 Da.
Natural source: Common Name: Pyrococcus furiosus Taxonomy ID: 2261 Superkingdom: Archaea Kingdom: not available Genus/species: Pyrococcus furiosus
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
SSR26: GCGAGCAAUGAUGAGUGAUG
GGCGAACUGAGCUCGAAAGA
GCAAUGAUGAGUGAUGGGCG
AACUGAGCUCGC
NOP5-NOP56_RELATED_PROTEIN: FISENVRGIYAFDENGNLIE
KRYFTDKPEKVLDQLLKGEI
TKDLEELLNSLKEKGYDEFV
FEHPCLSRRAKELGFSATTE
FPNIAGERLRSNPCEFLGEN
WFEEYYKVGVALTRMRIQEQ
SGARDKMVIQAIEALDDVDK
VINLLVARLREWYSLHFPEL
DELLPKHPQYVAFVKTVGHR
DNINEEVLRCLGLSECKIKK
ILEAKEKTMGAWMDQTDIEV
VRQLAEEIDRLYQLRKKLED
YIDRAMCDVAPNLKALVGAK
LAARLISLAGGLRELAMMPS
STIQVLGAEKALFRHLRTGA
KPPKHGVIYQYPAINRSPWW
QRGKIARALAGKLAIAARVD
YFCGEYIAEELKKELEARIR
EIKEKY
50S_RIBOSOMAL_PROTEIN_L7AE: KPSYVKFEVPKCLAEKALQA
VEIARDTGKIRKGTNETTKA
VERGCAKLVIIAEDVDPEEI
VAHLPPLCEECEIPYIYVPC
KKELGAAACIEVAAASVAII
EPGKARDLVEEIAMKVKELM
K
FIBRILLARIN-LIKE_RRNA-TRNA_2'-O-METHYLTRANSFERASE: MVEVKKHKFPGVYVVIDDDG
SEKIATKNLVPGQRVYGERV
IKWEGEEYRIWNPHRSKLGA
AIVNGLKNFPIKPGKSVLYL
GIASGTTASHVSDIVGWEGK
IYGIEFSPRVLRELVPIVEE
RRNIIPILGDATKPEEYRAL
VTKVDVIFEDVAQPTQAKIL
IDNAKAYLKRGGYGMIAVKS
RSIDVTKEPEQVFKEVEREL
SEYFEVIERLNLEPYEKDHA
LFVVRKP
5'-R(*UP*CP*GP*CP*CP*CP*AP*UP*CP*AP*CP)-3': UCGCCCAUCAC
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 79 |
| 1H chemical shifts | 240 |