BMRB Entry 25569
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR25569
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Title: PIN1 WW domain in complex with a phosphorylated CPEB1 derived peptide PubMed: 26456073
Deposition date: 2015-04-13 Original release date: 2015-10-26
Authors: Schelhorn, Constanze; Macias, Maria J.; Martin-Malpartida, Pau
Citation: Schelhorn, Constanze; Martin-Malpartida, Pau; Sunol, David; Macias, Maria J.. "Structural Analysis of the Pin1-CPEB1 interaction and its potential role in CPEB1 degradation" Sci. Rep. 5, 14990-14990 (2015).
Assembly members:
Pin1, polymer, 33 residues, 3901.367 Da.
CPEB1, polymer, 8 residues, 1007.111 Da.
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
Pin1: LPPGWEKRMSRSSGRVYYFN
HITNASQWERPSG
CPEB1: RIXPPLPF
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 235 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Pin1 | 1 |
| 2 | CPEB1 | 2 |
Entities:
Entity 1, Pin1 33 residues - 3901.367 Da.
| 1 | LEU | PRO | PRO | GLY | TRP | GLU | LYS | ARG | MET | SER | ||||
| 2 | ARG | SER | SER | GLY | ARG | VAL | TYR | TYR | PHE | ASN | ||||
| 3 | HIS | ILE | THR | ASN | ALA | SER | GLN | TRP | GLU | ARG | ||||
| 4 | PRO | SER | GLY |
Entity 2, CPEB1 8 residues - 1007.111 Da.
| 1 | ARG | ILE | SEP | PRO | PRO | LEU | PRO | PHE |
Samples:
sample_1: Pin1 1 mM; CPEB1 3 mM; D2O, [U-100% 2H], 10%; TRIS, [U-100% 2H], 20 mM; sodium chloride 130 mM
sample_conditions_1: pH: 7; pressure: 1 atm; temperature: 285 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-1H NOESY | sample_1 | isotropic | sample_conditions_1 |
| 2D 1H-1H TOCSY | sample_1 | isotropic | sample_conditions_1 |
Software:
CNSSOLVE, Brunger, Adams, Clore, Gros, Nilges and Read - structure solution
XEASY, Bartels et al. - chemical shift assignment
TOPSPIN, Bruker Biospin - collection
NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing
NMR spectrometers:
- Bruker Avance 600 MHz
Related Database Links:
| UNP | Q13526 Q91572 |
| BMRB | 16070 16088 17545 19258 19259 |
| PDB | |
| DBJ | BAA87037 BAA87038 BAB22270 BAB22743 BAC35631 |
| EMBL | CAG28582 |
| GB | AAC50492 AAH02899 AAH38254 AAH59553 AAI12584 |
| PRF | 2209428A |
| REF | NP_001029804 NP_001100171 NP_001231300 NP_001270625 NP_006212 |
| SP | Q13526 Q4R383 Q5BIN5 Q9QUR7 |
| TPG | DAA28013 |