BMRB Entry 25722
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR25722
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Title: Unveiling the structural determinants of KIAA0323 binding preference for NEDD8
Deposition date: 2015-07-21 Original release date: 2016-07-25
Authors: Santonico, Elena; Nepravishta, Ridvan; Mattioni, Anna; Valentini, Eleonora; Mandaliti, Walter; Procopio, Radha; Iannuccelli, Marta; Castagnoli, Luisa; Polo, Simona; Paci, Maurizio; Cesareni, Gianni
Citation: Santonico, Elena; Nepravishta, Ridvan; Mattioni, Anna; Valentini, Eleonora; Mandaliti, Walter; Procopio, Radha; Iannuccelli, Marta; Castagnoli, Luisa; Polo, Simona; Paci, Maurizio; Cesareni, Gianni. "Unveiling the structural determinants of KIAA0323 binding preference for NEDD8." Not known ., .-..
Assembly members:
KIAA0323, polymer, 52 residues, 6299.246 Da.
Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
KIAA0323: GGIRKTRETERLRRQLLEVF
WGQDHKVDFILQREPYCRDI
NQLSEALLSLNF
- assigned_chemical_shifts
| Data type | Count |
| 15N chemical shifts | 50 |
| 1H chemical shifts | 181 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | KIAA0323 | 1 |
Entities:
Entity 1, KIAA0323 52 residues - 6299.246 Da.
The sequence is the C-terminal end of KIAA0323
| 1 | GLY | GLY | ILE | ARG | LYS | THR | ARG | GLU | THR | GLU | ||||
| 2 | ARG | LEU | ARG | ARG | GLN | LEU | LEU | GLU | VAL | PHE | ||||
| 3 | TRP | GLY | GLN | ASP | HIS | LYS | VAL | ASP | PHE | ILE | ||||
| 4 | LEU | GLN | ARG | GLU | PRO | TYR | CYS | ARG | ASP | ILE | ||||
| 5 | ASN | GLN | LEU | SER | GLU | ALA | LEU | LEU | SER | LEU | ||||
| 6 | ASN | PHE |
Samples:
sample_1: KIAA0323, [U-100% 15N], 0.16 – 1.2 mM; H2O 90%; D2O 10%; Phosphate Buffer 12 mM
sample_conditions_1: ionic strength: 0.012 M; pH: 5.8; pressure: 1 atm; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
| 2D 1H-1H TOCSY | sample_1 | isotropic | sample_conditions_1 |
| 2D 1H-1H NOESY | sample_1 | isotropic | sample_conditions_1 |
| 3D 1H-15N NOESY | sample_1 | isotropic | sample_conditions_1 |
| 3D 1H-15N TOCSY | sample_1 | isotropic | sample_conditions_1 |
Software:
CNS, Brunger, Adams, Clore, Gros, Nilges and Read - geometry optimization, structure solution
NMR spectrometers:
- Bruker Avance 700 MHz
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts