BMRB Entry 25947
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR25947
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Title: Solution structure of KYE28A in lipopolysachharide PubMed: 27137928
Deposition date: 2016-01-11 Original release date: 2016-05-23
Authors: Bhunia, Anirban; Malmsten, Martin; Datta, Aritreyee
Citation: Bhunia, Anirban; Malmsten, Martin; Datta, Aritreyee. "Role of Aromatic Amino Acids in Lipopolysaccharide and Membrane Interactions of Antimicrobial Peptides for Use in Plant Disease Control" J. Biol. Chem. 291, 13301-13317 (2016).
Assembly members:
entity, polymer, 28 residues, 3283.888 Da.
Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
entity: KYEITTIHNLARKLTHRLAR
RNAGATLR
- assigned_chemical_shifts
Data type | Count |
1H chemical shifts | 183 |
Additional metadata:
Assembly:
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | entity | 1 |
Entities:
Entity 1, entity 28 residues - 3283.888 Da.
1 | LYS | TYR | GLU | ILE | THR | THR | ILE | HIS | ASN | LEU | ||||
2 | ALA | ARG | LYS | LEU | THR | HIS | ARG | LEU | ALA | ARG | ||||
3 | ARG | ASN | ALA | GLY | ALA | THR | LEU | ARG |
Samples:
sample_1: entity 1 mM; TSP 1 mM; H2O 90%; D2O 10%
sample_conditions_1: ionic strength: 0 M; pH: 4.5; pressure: 1 atm; temperature: 298 K
Experiments:
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
2D 1H-1H TOCSY | sample_1 | isotropic | sample_conditions_1 |
2D 1H-1H NOESY | sample_1 | isotropic | sample_conditions_1 |
Software:
CYANA v2.1, Guntert, Mumenthaler and Wuthrich - structure solution
NMR spectrometers:
- Bruker Ascend TM 700 MHz