BMRB Entry 34138
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR34138
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Title: NMR structure of an EphA2-Sam fragment PubMed: 29234063
Deposition date: 2017-05-12 Original release date: 2017-12-13
Authors: Mercurio, F.; Leone, M.
Citation: Mercurio, F.; Di Natale, C.; Pirone, L.; Iannitti, R.; Marasco, D.; Pedone, E.; Palumbo, R.; Leone, M.. "The Sam-Sam interaction between Ship2 and the EphA2 receptor: design and analysis of peptide inhibitors" Sci. Rep. 7, 17474-17474 (2017).
Assembly members:
entity_1, polymer, 27 residues, 2887.45 Da.
Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
entity_1: XKRIGVRLPGHQKRIAYSLL
GLKDQVX
- assigned_chemical_shifts
- spectral_peak_list
| Data type | Count |
| 1H chemical shifts | 202 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | entity_1 | 1 |
Entities:
Entity 1, entity_1 27 residues - 2887.45 Da.
| 1 | ACE | LYS | ARG | ILE | GLY | VAL | ARG | LEU | PRO | GLY | ||||
| 2 | HIS | GLN | LYS | ARG | ILE | ALA | TYR | SER | LEU | LEU | ||||
| 3 | GLY | LEU | LYS | ASP | GLN | VAL | NH2 |
Samples:
sample_1: Peptide fragment of EphA2-Sam 830 uM
sample_conditions_1: pH: 3.5; pressure: 1 atm; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-1H TOCSY | sample_1 | not available | sample_conditions_1 |
| 2D 1H-1H NOESY | sample_1 | not available | sample_conditions_1 |
| 2D DQF-COSY | sample_1 | not available | sample_conditions_1 |
Software:
CYANA v2.1, Guntert, Mumenthaler and Wuthrich - refinement
VNMRJ, Varian - processing
XEASY, Bartels et al. - chemical shift assignment
NMR spectrometers:
- Varian INOVA 600 MHz