BMRB Entry 4186
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4186
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Title: NMR Solution Structure of Human Cellular Retinoic Acid Binding Protein-Type II
Deposition date: 1998-08-13 Original release date: 2000-03-08
Authors: Wang, L.; Li, Yue; Abildgaard, Frits; Markley, John; Yan, Honggao
Citation: Wang, L.; Li, Yue; Abildgaard, Frits; Markley, John; Yan, Honggao. "NMR Solution Structure of type II Human Cellular Retinoic Acid Binding Protein: Implications for Ligand Binding" Biochemistry 37, 12727-12736 (1998).
Assembly members:
Cellular Retinoic Acid Binding Protein-Type II, polymer, 137 residues, Formula weight is not available
Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eucaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
Cellular Retinoic Acid Binding Protein-Type II: PNFSGNWKIIRSENFEELLK
VLGVNVMLRKIAVAAASKPA
VEIKQEGDTFYIKTSTTVRT
TEINFKVGEEFEEQTVDGRP
CKSLVKWESENKMVCEQKLL
KGEGPKTSWTRELTNDGELI
LTMTADDVVCTRVYVRE
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 331 |
| 15N chemical shifts | 118 |
| 1H chemical shifts | 820 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | CRABPII | 1 |
Entities:
Entity 1, CRABPII 137 residues - Formula weight is not available
| 1 | PRO | ASN | PHE | SER | GLY | ASN | TRP | LYS | ILE | ILE | ||||
| 2 | ARG | SER | GLU | ASN | PHE | GLU | GLU | LEU | LEU | LYS | ||||
| 3 | VAL | LEU | GLY | VAL | ASN | VAL | MET | LEU | ARG | LYS | ||||
| 4 | ILE | ALA | VAL | ALA | ALA | ALA | SER | LYS | PRO | ALA | ||||
| 5 | VAL | GLU | ILE | LYS | GLN | GLU | GLY | ASP | THR | PHE | ||||
| 6 | TYR | ILE | LYS | THR | SER | THR | THR | VAL | ARG | THR | ||||
| 7 | THR | GLU | ILE | ASN | PHE | LYS | VAL | GLY | GLU | GLU | ||||
| 8 | PHE | GLU | GLU | GLN | THR | VAL | ASP | GLY | ARG | PRO | ||||
| 9 | CYS | LYS | SER | LEU | VAL | LYS | TRP | GLU | SER | GLU | ||||
| 10 | ASN | LYS | MET | VAL | CYS | GLU | GLN | LYS | LEU | LEU | ||||
| 11 | LYS | GLY | GLU | GLY | PRO | LYS | THR | SER | TRP | THR | ||||
| 12 | ARG | GLU | LEU | THR | ASN | ASP | GLY | GLU | LEU | ILE | ||||
| 13 | LEU | THR | MET | THR | ALA | ASP | ASP | VAL | VAL | CYS | ||||
| 14 | THR | ARG | VAL | TYR | VAL | ARG | GLU |
Samples:
sample_one: Cellular Retinoic Acid Binding Protein-Type II1.5 – 2.0 mM
sample_conditions_one: pH: 7.3; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| NOESY | sample_one | not available | not available |
| TOCSY | sample_one | not available | not available |
| triple resonance experiments | sample_one | not available | not available |
Software:
FELIX v95 - Data processing and peak picking
NMR spectrometers:
- VARIAN UNITY 500 MHz
- BRUKER DMX 500 MHz
Related Database Links:
| PDB | |
| DBJ | BAG34945 BAJ83972 |
| EMBL | CAG29353 |
| GB | AAA52068 AAA58430 AAH01109 AAV38629 AAV38630 |
| REF | NP_001008670 NP_001186652 NP_001253818 NP_001869 XP_001166367 |
| SP | P29373 Q5PXY7 |
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts