BMRB Entry 4416
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4416
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Title: Solution-State Structure of a DNA Dodecamer Duplex Containing a Cis-Syn Thymine Cyclobutane Dimer.
Deposition date: 1999-09-20 Original release date: 2000-06-17
Authors: McAteer, K.; Jing, Y.; Kao, J.; Taylor, J.-S.; Kennedy, M.
Citation: McAteer, K.; Jing, Y.; Kao, J.; Taylor, J.-S.; Kennedy, M.. "Solution-state Structure of a DNA Dodecamer Duplex Containing a Cis-Syn Thymine Cyclobutane Dimer, the Major UV photoproduct of DNA." J. Mol. Biol. 282, 1013-1032 (1998).
Assembly members:
Cis-syn thymine cyclobutane dimer strand 1, polymer, 12 residues, Formula weight is not available
Cis-syn thymine cyclobutane dimer strand 2, polymer, 12 residues, Formula weight is not available
Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
Cis-syn thymine cyclobutane dimer strand 1: GCACGAATTAAG
Cis-syn thymine cyclobutane dimer strand 2: CTTAATTCGTGC
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 193 |
| 31P chemical shifts | 22 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | strand 1 | 1 |
| 2 | strand 2 | 2 |
Entities:
Entity 1, strand 1 12 residues - Formula weight is not available
| 1 | DG | DC | DA | DC | DG | DA | DA | DT | DT | DA | ||||
| 2 | DA | DG |
Entity 2, strand 2 12 residues - Formula weight is not available
| 1 | DC | DT | DT | DA | DA | DT | DT | DC | DG | DT | ||||
| 2 | DG | DC |
Samples:
sample_1: Cis-syn thymine cyclobutane dimer 1.2 mM
sample_conditions_1: pH*: 6.6; temperature: 278 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| NOESY | sample_1 | not available | sample_conditions_1 |
| DQF-COSY | sample_1 | not available | sample_conditions_1 |
| HELCO | sample_1 | not available | sample_conditions_1 |
| hetero-TOCSY | sample_1 | not available | sample_conditions_1 |
Software:
No software information available
NMR spectrometers:
- Varian Unity Plus 750 MHz
- Varian Unity Plus 500 MHz