BMRB Entry 4507
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4507
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Title: Solution Structure of Carnobacteriocin B2 and Implications for Structure- Activity Relationships Among Type IIa Bacteriocins from Lactic Acid Bacteria PubMed: 10572140
Deposition date: 1999-10-08 Original release date: 2001-03-06
Authors: Wang, Y.; Henz, M.; Gallagher, N.; Chai, S.; Yan, L.; Gibbs, A.; Stiles, M.; Wishart, D.; Vederas, J.
Citation: Wang, Y.; Henz, M.; Gallagher, N.; Chai, S.; Yan, L.; Gibbs, A.; Stiles, M.; Wishart, D.; Vederas, J.. "Solution Structure of Carnobacteriocin B2 and Implications for Structure- Activity Relationships Among Type IIa Bacteriocins from Lactic Acid Bacteria" Biochemistry 38, 15438-15447 (1999).
Assembly members:
Type IIA bacteriocin leucocin A, polymer, 37 residues, Formula weight is not available
Natural source: Common Name: Leuconostoc gelidum Taxonomy ID: 1244 Superkingdom: Bacteria Kingdom: not available Genus/species: Leuconostoc gelidum
Experimental source: Production method: recombinant technology Host organism: Leuconostoc gelidum
Entity Sequences (FASTA):
Type IIA bacteriocin leucocin A: KYYGNGVHCTKSGCSVNWGE
AFSAGVHRLANGGNGFW
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 160 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | BACT-IIA | 1 |
Entities:
Entity 1, BACT-IIA 37 residues - Formula weight is not available
| 1 | LYS | TYR | TYR | GLY | ASN | GLY | VAL | HIS | CYS | THR | ||||
| 2 | LYS | SER | GLY | CYS | SER | VAL | ASN | TRP | GLY | GLU | ||||
| 3 | ALA | PHE | SER | ALA | GLY | VAL | HIS | ARG | LEU | ALA | ||||
| 4 | ASN | GLY | GLY | ASN | GLY | PHE | TRP |
Samples:
sample_1: Type IIA bacteriocin leucocin A 2 mM; TFE, [U-2H], 90%; H2O 10%
sample_cond_1: pH: 2.8; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D NOESY | not available | not available | not available |
Software:
X-PLOR v3.85 - structure solution
VNMR v5.1 - processing
NMR spectrometers:
- VARIAN UNITY 500 MHz