BMRB Entry 4639
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4639
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Title: NMR structure of the hRap1 Myb motif reveals a canonical three helix bundle lacking the positive surface charge typical of Myb DNA binding domains
Deposition date: 2000-07-24 Original release date: 2002-04-03
Authors: Hanaoka, S; Nagadoi, A; Yoshimura, S; Aimoto, S; Li, B; de Lange, T; Nishimura, Y
Citation: Hanaoka, S; Nagadoi, A; Yoshimura, S; Aimoto, S; Li, B; de Lange, T; Nishimura, Y. "NMR structure of the hRap1 Myb motif reveals a canonical three helix bundle lacking the positive surface charge typical of Myb DNA binding domains" J. Mol. Biol. 312, 167-175 (2001).
Assembly members:
TRF2-INTERACTING TELOMERIC RAP1 PROTEIN, polymer, 59 residues, Formula weight is not available
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
TRF2-INTERACTING TELOMERIC RAP1 PROTEIN: GRIAFTDADDVAILTYVKEN
ARSPSSVTGNALWKAMEKSS
LTQHSWQSLKDRYLKHLRG
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 379 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | hRap1 Myb domain | 1 |
Entities:
Entity 1, hRap1 Myb domain 59 residues - Formula weight is not available
| 1 | GLY | ARG | ILE | ALA | PHE | THR | ASP | ALA | ASP | ASP | ||||
| 2 | VAL | ALA | ILE | LEU | THR | TYR | VAL | LYS | GLU | ASN | ||||
| 3 | ALA | ARG | SER | PRO | SER | SER | VAL | THR | GLY | ASN | ||||
| 4 | ALA | LEU | TRP | LYS | ALA | MET | GLU | LYS | SER | SER | ||||
| 5 | LEU | THR | GLN | HIS | SER | TRP | GLN | SER | LEU | LYS | ||||
| 6 | ASP | ARG | TYR | LEU | LYS | HIS | LEU | ARG | GLY |
Samples:
sample_1: TRF2-INTERACTING TELOMERIC RAP1 PROTEIN 1.0 mM; potassium phosphate 100 mM; NaN3 1.0 mM; H2O 90%; D2O 10%
sample_cond_1: pH: 5.5; temperature: 300 K; pressure: 1 atm
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-1H DQF-COSY | sample_1 | not available | sample_cond_1 |
| 2D 1H-1H NOESY | sample_1 | not available | sample_cond_1 |
| 2D 1H-1H TOCSY | sample_1 | not available | sample_cond_1 |
Software:
NMRPipe v4.2.5 - processing
X-PLOR v3.851 - structure solution
NMR spectrometers:
- Bruker DMX 500 MHz
- Bruker DMX 600 MHz
Related Database Links:
| PDB | |
| DBJ | BAA91317 BAE00469 BAE01995 BAE87910 BAE88172 |
| GB | AAF72711 AAH04465 AAH05841 AAH22428 AAH78171 |
| REF | NP_001267142 NP_061848 XP_001110856 XP_003780774 XP_003829596 |
| SP | Q4R4I0 Q9NYB0 |