BMRB Entry 4653
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4653
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Title: Solution structure of third intradiskal loop of bovine rhodopsin (residues 268-293) PubMed: 10888202
Deposition date: 2000-01-28 Original release date: 2001-05-09
Authors: Yeagle, P.; Salloum, A.; Chopra, A.; Bhawsar, N.; Ali, L.
Citation: Yeagle, P.; Salloum, A.; Chopra, A.; Bhawsar, N.; Ali, L.; Kuzmanovski, G.; Alderfer, J.; Albert, A.. "Structures of the intradiskal loops and amino terminus of the G-protein receptor, rhodopsin" J. Pept. Res. 55, 455-465 (2000).
Assembly members:
RHODOPSIN, polymer, 26 residues, Formula weight is not available
Natural source: Common Name: cow Taxonomy ID: 9913 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Bos taurus
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
RHODOPSIN: YAGVAFYIFTHQGSDFGPIF
MTIPAF
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 159 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | RHODOPSIN | 1 |
Entities:
Entity 1, RHODOPSIN 26 residues - Formula weight is not available
| 1 | TYR | ALA | GLY | VAL | ALA | PHE | TYR | ILE | PHE | THR | ||||
| 2 | HIS | GLN | GLY | SER | ASP | PHE | GLY | PRO | ILE | PHE | ||||
| 3 | MET | THR | ILE | PRO | ALA | PHE |
Samples:
sample_1: RHODOPSIN 2 mM; DMSO%
sample_cond_1: temperature: 303 K; pressure: 1 atm
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D NOESY | sample_1 | not available | sample_cond_1 |
| DQF-COSY | sample_1 | not available | sample_cond_1 |
Software:
FELIX - data analysis
DIANA - structure solution
NMR spectrometers:
- Bruker AMX 600 MHz
Related Database Links:
| PDB | |
| DBJ | BAB83621 |
| GB | AAA30674 ADB43478 AGL13378 ELR51227 |
| PRF | 0811197A 0901188A 0901212A 0906201A 1001148A |
| REF | NP_001014890 XP_004018583 XP_005902896 XP_005955807 XP_006078962 |
| SP | P02699 P02700 |
| TPG | DAA16827 |