BMRB Entry 5681
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR5681
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Title: DIMERIC SOLUTION STRUCTURE OF THE CYCLIC OCTAMER CD(CGCTCATT) PubMed: 12733903
Deposition date: 2003-01-31 Original release date: 2003-08-07
Authors: Escaja, N.; Gelpi, J.; Orozco, M.; Rico, M.; Pedroso, E.; Gonzalez, C.
Citation: Escaja, N.; Gelpi, J.; Orozco, M.; Rico, M.; Pedroso, E.; Gonzalez, C.. "Four-stranded DNA Structure Stabilized by a Novel C:G:A:T Tetrad" J. Am. Chem. Soc. 125, 5654-5662 (2003).
Assembly members:
D(CGCTCATT), polymer, 8 residues, Formula weight is not available
Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
D(CGCTCATT): CGCTCATT
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 91 |
| 31P chemical shifts | 8 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | CYCLIC OLIGONUCLEOTIDE D(CGCTCATT), chain 1 | 1 |
| 2 | CYCLIC OLIGONUCLEOTIDE D(CGCTCATT), chain 2 | 1 |
Entities:
Entity 1, CYCLIC OLIGONUCLEOTIDE D(CGCTCATT), chain 1 8 residues - Formula weight is not available
| 1 | DC | DG | DC | DT | DC | DA | DT | DT |
Samples:
sample_1: D(CGCTCATT) 5 mM
sample_cond_1: pH: 7.0; pressure: 1 atm; temperature: 278 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D NOESY | sample_1 | not available | sample_cond_1 |
| DQF-COSY | sample_1 | not available | sample_cond_1 |
| hetero COSY | sample_1 | not available | sample_cond_1 |
Software:
MARDIGRAS - iterative matrix relaxation
DYANA v1.5 - structure calculation
AMBER v5.1 - refinement
NMR spectrometers:
- Bruker DMX 600 MHz