BMRB Entry 5714
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR5714
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Title: 1H Chemical shift assignments of the major conformation of a 11-mer DNA duplex containing an AG Mismatch PubMed: 12893083
Deposition date: 2003-03-03 Original release date: 2003-09-15
Authors: Sanchez, Ana; Volk, David; Gorenstein, David; Lloyd, R.
Citation: Sanchez, Ana; Volk, David; Gorenstein, David; Lloyd, R.. "Initiation of Repair of A/G Mismatches is Modulated by Sequence Context" DNA Repair 2, 863-878 (2003).
Assembly members:
DNA Duplex, polymer, 11 residues, Formula weight is not available
DNA Duplex, polymer, 11 residues, Formula weight is not available
Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
DNA Duplex: GCTTCAGTCGT
DNA Duplex: ACGACGGAAGC
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 219 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Strand A | 1 |
| 2 | Strand B | 2 |
Entities:
Entity 1, Strand A 11 residues - Formula weight is not available
| 1 | DG | DC | DT | DT | DC | DA | DG | DT | DC | DG | ||||
| 2 | DT |
Entity 2, Strand B 11 residues - Formula weight is not available
| 1 | DA | DC | DG | DA | DC | DG | DG | DA | DA | DG | ||||
| 2 | DC |
Samples:
Sample_1: DNA Duplex 1.0 mM; DNA Duplex 1.0 mM; Na Phosphate 25.0 mM; NaCl 50.0 mM; EDTA 1.0 mM
Condition_1: ionic strength: 0.11 mM; pH: 6.8; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D NOE | not available | not available | not available |
Software:
VNMR v6.1 - processing, volume determination
NMR spectrometers:
- Varian UNITYplus 750 MHz
- Varian UNITYplus 600 MHz