BMRB Entry 5801
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR5801
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Title: Structural analysis of an EGF/TGF-alpha chimera with unique ErbB binding specificity PubMed: 12869572
Deposition date: 2003-05-19 Original release date: 2003-10-13
Authors: Wingens, Miriam; Walma, Tine; van Ingen, Hugo; Stortelers, Catelijne; van Leeuwen, Jeroen; van Zoelen, Everardus; Vuister, Geerten
Citation: Wingens, Miriam; Walma, Tine; van Ingen, Hugo; Stortelers, Catelijne; van Leeuwen, Jeroen; van Zoelen, Everardus; Vuister, Geerten. "Structural Analysis of an Epidermal Growth Factor/Transforming Growth Factor-alpha Chimera with Unique ErbB Binding Specificity specificity" J. Biol. Chem. 278, 39114-39123 (2003).
Assembly members:
T1E, polymer, 54 residues, Formula weight is not available
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology Host organism: Pichia pastoris
Entity Sequences (FASTA):
T1E: VVSHFNDCPLSHDGYCLHDG
VCMYIEALDKYACNCVVGYI
GERCQYRDLKWWEL
- assigned_chemical_shifts
- coupling_constants
- heteronucl_NOEs
- heteronucl_T1_relaxation
| Data type | Count |
| 15N chemical shifts | 56 |
| 1H chemical shifts | 346 |
| coupling constants | 51 |
| T1 relaxation values | 52 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | T1E | 1 |
Entities:
Entity 1, T1E 54 residues - Formula weight is not available
| 1 | VAL | VAL | SER | HIS | PHE | ASN | ASP | CYS | PRO | LEU | ||||
| 2 | SER | HIS | ASP | GLY | TYR | CYS | LEU | HIS | ASP | GLY | ||||
| 3 | VAL | CYS | MET | TYR | ILE | GLU | ALA | LEU | ASP | LYS | ||||
| 4 | TYR | ALA | CYS | ASN | CYS | VAL | VAL | GLY | TYR | ILE | ||||
| 5 | GLY | GLU | ARG | CYS | GLN | TYR | ARG | ASP | LEU | LYS | ||||
| 6 | TRP | TRP | GLU | LEU |
Samples:
sample_1: T1E, [U-15N], 0.8 mM; K2HPO4/KH2PO4 50 mM
cond_set_1: pH: 6.3; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 3D 1H-15N NOESY | sample_1 | not available | cond_set_1 |
| 3D 1H-15N TOCSY | sample_1 | not available | cond_set_1 |
| 2D NOESY | sample_1 | not available | cond_set_1 |
| 3D HNHA | sample_1 | not available | cond_set_1 |
| 3D HNHB | sample_1 | not available | cond_set_1 |
Software:
NMRPipe v1.8 - spectral processing
XEASY v1.2 - assignment, peak integration
X-PLOR v3.851 - restrained molecular dynamics
NMR spectrometers:
- Varian UnityPlus 800 MHz
- Varian UnityInova 600 MHz
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SPARKY: Backbone
or all simulated shifts