BMRB Entry 6349
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR6349
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Title: 1H, 13C and 15N Chemical Shift Assignments for the LH1 Alfa Polypeptide of Rhodospirillum rubrum PubMed: 15740753
Deposition date: 2004-10-12 Original release date: 2005-03-17
Authors: Wang, Zheng-Yu; Gokan, Kazutaka; Kobayashi, Masayuki; Nozawa, Tsunenori
Citation: Wang, Zheng-Yu; Gokan, Kazutaka; Kobayashi, Masayuki; Nozawa, Tsunenori. "Solution Structures of the Core Light-harvesting alpha and beta Polypeptides from Rhodospirillum rubrum: Implications for the Pigment-Protein and Protein-Protein Interactions" J. Mol. Biol. 347, 465-477 (2005).
Assembly members:
Alfa subunit of LH1 complex, polymer, 52 residues, Formula weight is not available
Natural source: Common Name: Rhodospirillum rubrum Taxonomy ID: 1085 Superkingdom: Eubacteria Kingdom: not available Genus/species: Rhodospirillum rubrum
Experimental source: Production method: purified from the natural source
Entity Sequences (FASTA):
Alfa subunit of LH1 complex: MWRIWQLFDPRQALVGLATF
LFVLALLIHFILLSTERFNW
LEGASTKPVQTS
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 210 |
| 13C chemical shifts | 147 |
| 15N chemical shifts | 50 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | LH1 alfa | 1 |
Entities:
Entity 1, LH1 alfa 52 residues - Formula weight is not available
| 1 | MET | TRP | ARG | ILE | TRP | GLN | LEU | PHE | ASP | PRO | ||||
| 2 | ARG | GLN | ALA | LEU | VAL | GLY | LEU | ALA | THR | PHE | ||||
| 3 | LEU | PHE | VAL | LEU | ALA | LEU | LEU | ILE | HIS | PHE | ||||
| 4 | ILE | LEU | LEU | SER | THR | GLU | ARG | PHE | ASN | TRP | ||||
| 5 | LEU | GLU | GLY | ALA | SER | THR | LYS | PRO | VAL | GLN | ||||
| 6 | THR | SER |
Samples:
sample_LH1a: Alfa subunit of LH1 complex, [U-95% 13C; U-95% 15N], 0.5 – 1.5 mM; chloroform-d:methanol-d3 [1:1 (v/v)] 100%
Ex-cond: pH*: . na; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 1H-15N NOESY-HSQC | not available | not available | not available |
| 1H-15N TOCSY-HSQC | not available | not available | not available |
| HNCA | not available | not available | not available |
| HN(CO)CA | not available | not available | not available |
| CBCANH | not available | not available | not available |
| CBCA(CO)NH | not available | not available | not available |
| HBHANH | not available | not available | not available |
| HBHA(CO)NH | not available | not available | not available |
Software:
NMRView v5.0.4 -
NMR spectrometers:
- Bruker DRX 400 MHz
Related Database Links:
| PDB | |
| GB | AAA26462 ABC23771 AEO49511 |
| PRF | 0708175A |
| REF | WP_011390724 YP_006049308 YP_428058 |
| SP | P02947 |
Download simulated HSQC data in one of the following formats:
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or all simulated shifts
SPARKY: Backbone
or all simulated shifts