BMRB Entry 6400

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6400

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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: 1H, 13C, and 15N Chemical Shift Assignments for the Wild-Type Matrix Protein of Mason-Pfizer Monkey Virus (M-PMV)

Deposition date: 2004-11-24 Original release date: 2005-07-26

Authors: Vlach, Jiri; Lipov, Jan; Ruml, Tomas; Hrabal, Richard

Citation: Vlach, Jiri; Lipov, Jan; Veverka, V.; Rumlova, M.; Ruml, Tomas; Hrabal, Richard. "Letter to the Editor: Assignment of 1H, 13C, and 15N resonances of WT matrix protein and its R55F mutant from Mason-Pfizer monkey virus" J. Biomol. NMR 31, 381-382 (2005).

Assembly members:
M-PMV WT MA, polymer, 100 residues, Formula weight is not available

Natural source: Common Name: Mason-Pfizer monkey virus Taxonomy ID: 11855 Superkingdom: Viruses Kingdom: not available Genus/species: Betaretrovirus Mason-Pfizer monkey virus

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):
M-PMV WT MA: MGQELSQHERYVEQLKQALK TRGVKVKYADLLKFFDFVKD TCPWFPQEGTIDIKRWRRVG DCFQDYYNTFGPEKVPVTAF SYWNLIKELIDKKEVNPQVM

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	388
1H chemical shifts	551
15N chemical shifts	96

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	wt ma	1

Entities:

Entity 1, wt ma 100 residues - Formula weight is not available

1	MET	GLY	GLN	GLU	LEU	SER	GLN	HIS	GLU	ARG
2	TYR	VAL	GLU	GLN	LEU	LYS	GLN	ALA	LEU	LYS
3	THR	ARG	GLY	VAL	LYS	VAL	LYS	TYR	ALA	ASP
4	LEU	LEU	LYS	PHE	PHE	ASP	PHE	VAL	LYS	ASP
5	THR	CYS	PRO	TRP	PHE	PRO	GLN	GLU	GLY	THR
6	ILE	ASP	ILE	LYS	ARG	TRP	ARG	ARG	VAL	GLY
7	ASP	CYS	PHE	GLN	ASP	TYR	TYR	ASN	THR	PHE
8	GLY	PRO	GLU	LYS	VAL	PRO	VAL	THR	ALA	PHE
9	SER	TYR	TRP	ASN	LEU	ILE	LYS	GLU	LEU	ILE
10	ASP	LYS	LYS	GLU	VAL	ASN	PRO	GLN	VAL	MET

Samples:

sample_1: M-PMV WT MA, [U-13C; U-15N], 1 mM; NaH(PO4)2/NaH2PO4 100 mM; NaCl 200 mM; DTT 10 mM; D2O 10%

conditions_1: pH: 6.0; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
1H-15N HSQC	sample_1	not available	conditions_1
1H-13C HSQC	sample_1	not available	conditions_1
HNCA	sample_1	not available	conditions_1
HNCACB	sample_1	not available	conditions_1
CBCA(CO)NH	sample_1	not available	conditions_1
HNCO	sample_1	not available	conditions_1
13C-edited HMQC-NOESY	sample_1	not available	conditions_1
15N-edited HSQC-NOESY	sample_1	not available	conditions_1
HcCH-COSY	sample_1	not available	conditions_1

Software:

NMRPipe v2.3 -

Sparky v3.110 -

CSI v2.0 -

NMR spectrometers:

Bruker Avance 500 MHz

BMRB	18282 25087 6401
PDB	1BAX 2F76 2F77 2LPY
GB	AAA47710 AAA47730 AAC82573 AAC82574 AAC82576
PIR	FOLJSA
REF	NP_056891 NP_056892 NP_056893 NP_954557 NP_954565
SP	P04022 P07567

Biological Magnetic Resonance Data Bank