BMRB Entry 6561
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR6561
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Title: NMR structure of plantaricin a in dpc micelles, 20 structures PubMed: 15805109
Deposition date: 2005-03-18 Original release date: 2005-08-22
Authors: Kristiansen, P.; Fimland, G.; Mantzilas, D.; Nissen-Meyer, J.
Citation: Kristiansen, P.; Fimland, G.; Mantzilas, D.; Nissen-Meyer, J.. "Structure and mode of action of the membrane-permeabilizing antimicrobial peptide pheromone plantaricin A" J. Biol. Chem. 280, 22945-22950 (2005).
Assembly members:
plantaricin A, polymer, 26 residues, Formula weight is not available
Natural source: Common Name: Lactobacillus plantarum Taxonomy ID: 1590 Superkingdom: Eubacteria Kingdom: not available Genus/species: Lactobascillus Plantarum
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
plantaricin A: KSSAYSLQMGATAIKQVKKL
FKKWGW
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 179 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | plantaricin A | 1 |
Entities:
Entity 1, plantaricin A 26 residues - Formula weight is not available
| 1 | LYS | SER | SER | ALA | TYR | SER | LEU | GLN | MET | GLY | ||||
| 2 | ALA | THR | ALA | ILE | LYS | GLN | VAL | LYS | LYS | LEU | ||||
| 3 | PHE | LYS | LYS | TRP | GLY | TRP |
Samples:
sample_1: plantaricin A 2.9 mM
sample_cond_1: pH*: 4; temperature: 298 K; ionic strength: 0 M; pressure: 1 atm
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| NOESY | not available | not available | not available |
| TOCSY | not available | not available | not available |
| DQCOSY | not available | not available | not available |
| 1H-15N HSQC | not available | not available | not available |
Software:
CYANA v1.1 - refinement, structure calculation, automated assignemnt, structure annealing
TALOS v98.040.21.02 - Dihedral angle prediction
NMR spectrometers:
- Varian INOVA 800 MHz