BMRB Entry 7085

Name: Assignment of hypothetical protein yst6499
Published: 2006-10-20

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PDB ID: 2grg
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7085
MolProbity Validation Chart

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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: Assignment of hypothetical protein yst6499

Deposition date: 2006-04-24 Original release date: 2006-10-20

Authors: Wu, Bin; Yee, Adelina; Lemak, Alexander; Ramelot, Theresa; Semesi, Anthony; Kennedy, Michael; Arrowsmith, Cheryl

Citation: Wu, Bin; Yee, Adelina; Lemak, Alexander; Ramelot, Theresa; Semesi, Anthony; Kennedy, Michael; Arrowsmith, Cheryl. "Solution structure of hypothetical protein yst6499 from Saccharomyces cerevisiae/ Northeast Structural Genomics Consortium Target YT727/ Ontario Center for Structural Proteomics Target yst6499" The BMRB entry is the only known published source for the data..

Assembly members:
hypothetical protein yst6499, polymer, 120 residues, 13343.00 Da.

Natural source: Common Name: Saccharomyces cerevisiae Taxonomy ID: 2303 Superkingdom: Bacteria Kingdom: not available Genus/species: saccharomyces cerevisiae

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):
hypothetical protein yst6499: MGSSHHHHHHSSGRENLYFQ GHMKSSIPITEVLPRAVGSL TFDENYNLLDTSGVAKVIEK SPIAEIIRKSNAELGRLGYS VYEDAQYIGHAFKKAGHFIV YFTPKNKNREGVVPPVGITN

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	405
15N chemical shifts	91
1H chemical shifts	679

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	yst6499	1

Entities:

Entity 1, yst6499 120 residues - 13343.00 Da.

1	MET	GLY	SER	SER	HIS	HIS	HIS	HIS	HIS	HIS
2	SER	SER	GLY	ARG	GLU	ASN	LEU	TYR	PHE	GLN
3	GLY	HIS	MET	LYS	SER	SER	ILE	PRO	ILE	THR
4	GLU	VAL	LEU	PRO	ARG	ALA	VAL	GLY	SER	LEU
5	THR	PHE	ASP	GLU	ASN	TYR	ASN	LEU	LEU	ASP
6	THR	SER	GLY	VAL	ALA	LYS	VAL	ILE	GLU	LYS
7	SER	PRO	ILE	ALA	GLU	ILE	ILE	ARG	LYS	SER
8	ASN	ALA	GLU	LEU	GLY	ARG	LEU	GLY	TYR	SER
9	VAL	TYR	GLU	ASP	ALA	GLN	TYR	ILE	GLY	HIS
10	ALA	PHE	LYS	LYS	ALA	GLY	HIS	PHE	ILE	VAL
11	TYR	PHE	THR	PRO	LYS	ASN	LYS	ASN	ARG	GLU
12	GLY	VAL	VAL	PRO	PRO	VAL	GLY	ILE	THR	ASN

Samples:

sample_1: hypothetical protein yst6499, [U-13C; U-15N], 1 mM; NaCl 250 mM; tris 10 mM

cond_set1: ionic strength: 0.25 M; pH: 7.1; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
15N HSQC	not available	not available	not available
HNCO	not available	not available	not available
CBCAcoNH	not available	not available	not available
HNCACB	not available	not available	not available
HNCA	not available	not available	not available
HNcoCA	not available	not available	not available
CCTOCSY_NH	not available	not available	not available
HCCTOCSY_NH	not available	not available	not available
13C HSQC	not available	not available	not available
HCCHTOCSY	not available	not available	not available
HCCHCOSY	not available	not available	not available
CCHTOCSY	not available	not available	not available
15N NOESY	not available	not available	not available
13C NOESY	not available	not available	not available

Software:

SPARKY v3.95 - assignemt, spectral analysis

NMR spectrometers:

Varian INOVA 600 MHz

PDB	2GRG
DBJ	GAA26128
EMBL	CAY82229
GB	AHY77122 EDN62841 EDV12232 EEU08283 EIW08126
REF	NP_061494
SP	Q3E841
TPG	DAA10576

Biological Magnetic Resonance Data Bank