BMRB Entry 20115
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR20115
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Title: Substance P 40 structures in water pH 5.5 298 K NMR DATA & STRUCTURES PubMed: 20937248
Deposition date: 2009-12-31 Original release date: 2010-10-27
Authors: Gayen, Anindita; Mukhopadhyay, Chaitali
Citation: Gayen, Anindita; Goswami, Sudipto Kishore; Mukhopadhyay, Chaitali. "NMR evidence of GM1-induced conformational change of Substance P using isotropic bicelles." Biochim. Biophys. Acta 1808, 127-139 (2011).
Assembly members:
Substance_P, polymer, 11 residues, Formula weight is not available
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
Substance_P: RPKPQQFFGLM
- assigned_chemical_shifts
- conformer_family_coord_set
| Data type | Count |
| 1H chemical shifts | 88 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Substance P | 1 |
Entities:
Entity 1, Substance P 11 residues - Formula weight is not available
| 1 | ARG | PRO | LYS | PRO | GLN | GLN | PHE | PHE | GLY | LEU | ||||
| 2 | MET |
Samples:
sample_1: Substance P 3.7 mM
sample_conditions_1: pH: 5.5; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-1H TOCSY | sample_1 | isotropic | sample_conditions_1 |
| 2D 1H-1H NOESY | sample_1 | isotropic | sample_conditions_1 |
| 2D DQF-COSY | sample_1 | isotropic | sample_conditions_1 |
Software:
X-PLOR NIH, Charles Schwieters - refinement, structure solution
NMR spectrometers:
- Bruker DRX 500 MHz