BMRB Entry 4212

Name: Synthetic peptide corresponding to the major immunogen site of FMD virus
Published: 2000-02-23

Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR4212

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: Synthetic peptide corresponding to the major immunogen site of FMD virus

Deposition date: 1998-05-04 Original release date: 2000-02-23

Authors: Petit, M.; Benkirane, N.; Guichard, G.; Phan Chan Du, A.; Marraud, M.; Cung, M.; Briand, J.; Muller, S.

Citation: Petit, M.; Benkirane, N.; Guichard, G.; Phan Chan Du, A.; Marraud, M.; Cung, M.; Briand, J.; Muller, S.. "Solution structure of a retro-inverso peptide analogue mimicking the foot-and-mouth disease virus major antigenic site : structural basis for its antigenic crossreactivity with the parent peptide" J. Biol. Chem. 274, 3686-3692 (1999).

Assembly members:
FMDV peptide, polymer, 19 residues, Formula weight is not available

Natural source: Common Name: foot-and-mouth disease virus Taxonomy ID: 12110 Superkingdom: not available Kingdom: not available Genus/species: Aphthovirus not available

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):
FMDV peptide: XSGVRGDFGSLAPRVARQL

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_set_1

Data type	Count
1H chemical shifts	118

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	FMDV peptide	1

Entities:

Entity 1, FMDV peptide 19 residues - Formula weight is not available

1

AAC

SER

GLY

VAL

ARG

GLY

ASP

PHE

GLY

SER

2

LEU

ALA

PRO

ARG

VAL

ALA

ARG

GLN

LEU

Samples:

sample_1: FMDV peptide 3 mM

sample_cond_1: ionic strength: 0.1 M; pH: 5.7; pressure: 1 atm; temperature: 285 K

Experiments:

Name	Sample	Sample state	Sample conditions
COSY	sample_1	not available	sample_cond_1
TOCSY	sample_1	not available	sample_cond_1
ROESY	sample_1	not available	sample_cond_1
NOESY	sample_1	not available	sample_cond_1

Software:

No software information available

NMR spectrometers:

Bruker DRX 400 MHz