BMRB Entry 4654
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4654
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Title: Solution structure of 2nd intradiskal loop of bovine rhodopsin (residues 172-205) PubMed: 10888202
Deposition date: 2000-01-28 Original release date: 2001-05-10
Authors: Yeagle, P.; Salloum, A.; Chopra, A.; Bhawsar, N.; Ali, L.
Citation: Yeagle, P.; Salloum, A.; Chopra, A.; Bhawsar, N.; Ali, L.; Kuzmanovski, G.; Alderfer, J.; Albert, A.. "Structures of the intradiskal loops and amino terminus of the G-protein receptor, rhodopsin" J. Pept. Res. 55, 455-465 (2000).
Assembly members:
RHODOPSIN, polymer, 34 residues, Formula weight is not available
Natural source: Common Name: cow Taxonomy ID: 9913 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Bos taurus
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
RHODOPSIN: LVGWSRYIPEGMQCSCGIDY
YTPHEETNNESFVI
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 200 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | RHODOPSIN | 1 |
Entities:
Entity 1, RHODOPSIN 34 residues - Formula weight is not available
| 1 | LEU | VAL | GLY | TRP | SER | ARG | TYR | ILE | PRO | GLU | ||||
| 2 | GLY | MET | GLN | CYS | SER | CYS | GLY | ILE | ASP | TYR | ||||
| 3 | TYR | THR | PRO | HIS | GLU | GLU | THR | ASN | ASN | GLU | ||||
| 4 | SER | PHE | VAL | ILE |
Samples:
sample_1: RHODOPSIN 2 mM; DMSO%
sample_cond_1: temperature: 303 K; pressure: 1 atm
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D NOESY | sample_1 | not available | sample_cond_1 |
| DQF-COSY | sample_1 | not available | sample_cond_1 |
Software:
FELIX - data analysis
DIANA - refinement
NMR spectrometers:
- Bruker AMX 600 MHz
Related Database Links:
| PDB | |
| DBJ | BAB83621 |
| GB | AAA30674 AAA30675 ACH67451 ACH67452 ACH67453 |
| PRF | 0811197A 0901188A 0901212A 0906201A 1001148A |
| REF | NP_001014890 XP_005902896 XP_006078962 XP_010860750 |
| SP | P02699 |
| TPG | DAA16827 |