BMRB Entry 5475
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR5475
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Title: Homology predicted structure and comparison with the secondary structure from NMR data for plastocyanin from the cyanobacterium synechocystis sp. PCC 6803
Deposition date: 2002-07-24 Original release date: 2002-08-22
Authors: Monleon, Daniel; Celda, Bernardo; Donaire, Antonio
Citation: Donaire, Antonio; Monleon, Daniel; Celda, Bernardo. "Homology predicted structure and comparison with the secondary structure from NMR data for plastocyanin from the cyanobacterium synechocystis sp. PCC 6803" Inorg. Chim. Acta 275-276, 73-89 (1998).
Assembly members:
plastocyanin synechocystis, polymer, 98 residues, Formula weight is not available
Natural source: Common Name: Synechocystis sp. Taxonomy ID: 1143 Superkingdom: Archaea Kingdom: not available Genus/species: Cyanobacterium synechocystis
Experimental source: Production method: purified from the natural source
Entity Sequences (FASTA):
plastocyanin synechocystis: ANATVKMGSDSGALVFEPST
VTIKAGEEVKWVNNKLSPHN
IVFAADGVDADTAAKLSHKG
LAFAAGESFTSTFTEPGTYT
YYCEPHRGAGMVGKVVVE
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 556 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | plastocyanin synechocystis | 1 |
Entities:
Entity 1, plastocyanin synechocystis 98 residues - Formula weight is not available
| 1 | ALA | ASN | ALA | THR | VAL | LYS | MET | GLY | SER | ASP | ||||
| 2 | SER | GLY | ALA | LEU | VAL | PHE | GLU | PRO | SER | THR | ||||
| 3 | VAL | THR | ILE | LYS | ALA | GLY | GLU | GLU | VAL | LYS | ||||
| 4 | TRP | VAL | ASN | ASN | LYS | LEU | SER | PRO | HIS | ASN | ||||
| 5 | ILE | VAL | PHE | ALA | ALA | ASP | GLY | VAL | ASP | ALA | ||||
| 6 | ASP | THR | ALA | ALA | LYS | LEU | SER | HIS | LYS | GLY | ||||
| 7 | LEU | ALA | PHE | ALA | ALA | GLY | GLU | SER | PHE | THR | ||||
| 8 | SER | THR | PHE | THR | GLU | PRO | GLY | THR | TYR | THR | ||||
| 9 | TYR | TYR | CYS | GLU | PRO | HIS | ARG | GLY | ALA | GLY | ||||
| 10 | MET | VAL | GLY | LYS | VAL | VAL | VAL | GLU |
Samples:
sample_1: plastocyanin synechocystis 4.0 mM
condition_1: pH: 5.4 na; temperature: 303 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| DQF-COSY | not available | not available | not available |
| H,H-TOCSY | not available | not available | not available |
| 2D-NOESY | not available | not available | not available |
Software:
GIFA v4 - analysis, processing
NMR spectrometers:
- Varian Unity 400 MHz
- Bruker DRX 600 MHz
Related Database Links:
| BMRB | 5584 |
| PDB | |
| DBJ | BAA10227 BAK51011 BAL30009 BAL33178 BAL36347 |
| EMBL | CAA38038 |
| GB | AGF52520 |
| REF | NP_442157 WP_010873453 YP_005384024 YP_005387193 YP_005409900 |
| SP | P21697 |