BMRB Entry 5807
Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR5807
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
NMR-STAR v2.1 text file (deprecated)
XML gzip file.
RDF gzip file.
All files associated with the entry
Title: Letter to the Editor: Assignments of 1H and 15N resonances of the bacteriophage lambda capsid stabilizing protein gpD PubMed: 14739644
Deposition date: 2003-05-22 Original release date: 2004-02-11
Authors: Iwai, Hideo
Citation: Iwai, Hideo; Forrer, Patrik; Pluckthun, Andreas; Guntert, Peter. "Lette to the Editor: Assignments of 1H and 15N resonances of the bacteriophage lambda capsid stabilizing protein gpD" J. Biomol. NMR 28, 89-90 (2004).
Assembly members:
bacteriophage lambda gpD, polymer, 109 residues, Formula weight is not available
Natural source: Common Name: Bacteriophage lambda Taxonomy ID: 10710 Superkingdom: virus Kingdom: not available Genus/species: Bacteriophage lambda
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
bacteriophage lambda gpD: TSKETFTHYQPQGNSDPAHT
ATAPGGLSAKAPAMTPLMLD
TSSRKLVAWDGTTDGAAVGI
LAVAADQTSTTLTFYKSGTF
RYEDVLWPEAASDETKKRTA
FAGTAISIV
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 701 |
| 15N chemical shifts | 110 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | gpD | 1 |
Entities:
Entity 1, gpD 109 residues - Formula weight is not available
| 1 | THR | SER | LYS | GLU | THR | PHE | THR | HIS | TYR | GLN | ||||
| 2 | PRO | GLN | GLY | ASN | SER | ASP | PRO | ALA | HIS | THR | ||||
| 3 | ALA | THR | ALA | PRO | GLY | GLY | LEU | SER | ALA | LYS | ||||
| 4 | ALA | PRO | ALA | MET | THR | PRO | LEU | MET | LEU | ASP | ||||
| 5 | THR | SER | SER | ARG | LYS | LEU | VAL | ALA | TRP | ASP | ||||
| 6 | GLY | THR | THR | ASP | GLY | ALA | ALA | VAL | GLY | ILE | ||||
| 7 | LEU | ALA | VAL | ALA | ALA | ASP | GLN | THR | SER | THR | ||||
| 8 | THR | LEU | THR | PHE | TYR | LYS | SER | GLY | THR | PHE | ||||
| 9 | ARG | TYR | GLU | ASP | VAL | LEU | TRP | PRO | GLU | ALA | ||||
| 10 | ALA | SER | ASP | GLU | THR | LYS | LYS | ARG | THR | ALA | ||||
| 11 | PHE | ALA | GLY | THR | ALA | ILE | SER | ILE | VAL |
Samples:
sample_1: bacteriophage lambda gpD, [U-98% 15N], 1.5 mM; potassium phosphate20 – 50 mM
sample_cond_1: pH: 6.0; temperature: 298 K; ionic strength: 0.02 M
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|
Software:
No software information available
NMR spectrometers:
- Bruker DRX 600 MHz
- Bruker Avance 800 MHz
Related Database Links:
| PDB | |
| DBJ | BAB35057 BAB35598 BAI23942 BAI25490 BAI29409 |
| EMBL | CAQ31253 CAR12629 CAU96661 CBG34517 CBJ00729 |
| GB | AAA96539 AAG55984 AAN81621 AAQ93654 AAQ93658 |
| REF | NP_040586 NP_287372 NP_309661 NP_310202 NP_755051 |
| SP | P03712 |
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts