BMRB Entry 6366
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6366
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Title: 1H, 13C, and 15N Chemical Shift Assignments of Bacillus subtilis Protein yqbG: The Northeast Structural Genomics Consortium Target SR215 PubMed: 16281282
Deposition date: 2004-10-27 Original release date: 2007-11-09
Authors: Liu, Gaohua; Ma, LiChung; Shen, Yang; Acton, Thomas; Atreya, Hanudatta; Xiao, Rong; Joachimiak, Andrzej; Montelione, Gaetano; Szyperski, Thomas
Citation: Liu, Gaohua; Shen, Yang; Xiao, Rong; Acton, Thomas; Ma, LiChung; Joachimiak, Andrzej; Montelione, Gaetano; Szyperski, Thomas. "NMR structure of protein yqbG from Bacillus subtilis reveals a novel alpha-helical protein fold" Proteins 62, 288-291 (2006).
Assembly members:
Hypothetical protein yqbG, polymer, 139 residues, Formula weight is not available
Natural source: Common Name: Bacillus subtilis Taxonomy ID: 1423 Superkingdom: Bacteria Kingdom: not available Genus/species: Bacillus subtilis
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
Hypothetical protein yqbG: MLLITPDELKSYSVFESVKT
RPDELLKQDILEATADIILK
VGHDFSDAEYIPLPETVRLA
LLKLSQFYALINGDESIIKG
YTTEKIGDYSYTLGDGSSLQ
KPDVYALIKDYVKPADPDLE
GIEAKVRMRSILEHHHHHH
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 969 |
| 13C chemical shifts | 483 |
| 15N chemical shifts | 127 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Hypothetical protein yqbG | 1 |
Entities:
Entity 1, Hypothetical protein yqbG 139 residues - Formula weight is not available
| 1 | MET | LEU | LEU | ILE | THR | PRO | ASP | GLU | LEU | LYS | ||||
| 2 | SER | TYR | SER | VAL | PHE | GLU | SER | VAL | LYS | THR | ||||
| 3 | ARG | PRO | ASP | GLU | LEU | LEU | LYS | GLN | ASP | ILE | ||||
| 4 | LEU | GLU | ALA | THR | ALA | ASP | ILE | ILE | LEU | LYS | ||||
| 5 | VAL | GLY | HIS | ASP | PHE | SER | ASP | ALA | GLU | TYR | ||||
| 6 | ILE | PRO | LEU | PRO | GLU | THR | VAL | ARG | LEU | ALA | ||||
| 7 | LEU | LEU | LYS | LEU | SER | GLN | PHE | TYR | ALA | LEU | ||||
| 8 | ILE | ASN | GLY | ASP | GLU | SER | ILE | ILE | LYS | GLY | ||||
| 9 | TYR | THR | THR | GLU | LYS | ILE | GLY | ASP | TYR | SER | ||||
| 10 | TYR | THR | LEU | GLY | ASP | GLY | SER | SER | LEU | GLN | ||||
| 11 | LYS | PRO | ASP | VAL | TYR | ALA | LEU | ILE | LYS | ASP | ||||
| 12 | TYR | VAL | LYS | PRO | ALA | ASP | PRO | ASP | LEU | GLU | ||||
| 13 | GLY | ILE | GLU | ALA | LYS | VAL | ARG | MET | ARG | SER | ||||
| 14 | ILE | LEU | GLU | HIS | HIS | HIS | HIS | HIS | HIS |
Samples:
sample: Hypothetical protein yqbG, [U-13C; U-15N], 0.94 mM
sample_conditions: pH: 6.5; temperature: 298 K; pressure: 1 atm
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| GFT (4,3)D HNNCABCA | not available | not available | not available |
| GFT (4,3)D CABCA(CO)NHN | not available | not available | not available |
| GFT (4,3)D HABCAB(CO)NHN | not available | not available | not available |
| GFT (4,3)D HCCH | not available | not available | not available |
| SIMULTANEOUS HETERONUCLEAR RESOLVED [1H,1H]-NOESY | not available | not available | not available |
Software:
NMRPipe v2.3 -
XEASY v1.3.1.3 -
AUTOASSIGN v1.13.2 -
NMR spectrometers:
- Varain INOVA 600 MHz
- Varain INOVA 750 MHz
Related Database Links:
| PDB | |
| DBJ | BAA06940 BAA12402 BAM58677 |
| EMBL | CAB14553 CCU57215 CEI57836 CEJ78258 |
| GB | ADV93368 AGG62012 AHA78497 AIC41067 AIC45299 |
| REF | NP_390489 WP_004398566 WP_015714318 WP_017697475 WP_019715097 |
| SP | P45923 |
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts