BMRB Entry 6882
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6882
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Title: Backbone 1H, 13C, and 15N Chemical Shift Assignments for the extracellular sushi domain of the Interleukin-15 receptor PubMed: 16377614
Deposition date: 2005-11-01 Original release date: 2006-04-24
Authors: Lorenzen, Inken; Dingley, Andrew; Groetzinger, Joachim
Citation: Lorenzen, Inken; Dingley, Andrew; Jaques, Yannick; Groetzinger, Joachim. "The structure of the IL-15alpha-receptor and its implications for ligand binding" J. Biol. Chem. 281, 6642-6647 (2006).
Assembly members:
interleukin-15 receptor, polymer, 66 residues, Formula weight is not available
Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
interleukin-15 receptor: ITCPPPMSVEHADIWVKSYS
LYSRERYICNSGFKRKAGTS
SLTECVLNKATNVAHWTTPS
LKCIRD
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 287 |
| 15N chemical shifts | 65 |
| 1H chemical shifts | 379 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | interleukin-15 receptor | 1 |
Entities:
Entity 1, interleukin-15 receptor 66 residues - Formula weight is not available
| 1 | ILE | THR | CYS | PRO | PRO | PRO | MET | SER | VAL | GLU | ||||
| 2 | HIS | ALA | ASP | ILE | TRP | VAL | LYS | SER | TYR | SER | ||||
| 3 | LEU | TYR | SER | ARG | GLU | ARG | TYR | ILE | CYS | ASN | ||||
| 4 | SER | GLY | PHE | LYS | ARG | LYS | ALA | GLY | THR | SER | ||||
| 5 | SER | LEU | THR | GLU | CYS | VAL | LEU | ASN | LYS | ALA | ||||
| 6 | THR | ASN | VAL | ALA | HIS | TRP | THR | THR | PRO | SER | ||||
| 7 | LEU | LYS | CYS | ILE | ARG | ASP |
Samples:
sample_1: interleukin-15 receptor, [U-15N; U-13C], 1 mM; phosphate buffer 20 mM; NaCl 150 mM
conditions_1: pH: 7.4; pressure: 1 atm; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| HNCA | sample_1 | not available | conditions_1 |
| HC(CO)NH | sample_1 | not available | conditions_1 |
| (H)C(CO)NH | sample_1 | not available | conditions_1 |
| N15-edited NOESY | sample_1 | not available | conditions_1 |
| N15-edited TOCSY | sample_1 | not available | conditions_1 |
| 13C-edit TOCSY | sample_1 | not available | conditions_1 |
| 13C-edit NOESY | sample_1 | not available | conditions_1 |
| 13C-edit NOESY (D2O) | sample_1 | not available | conditions_1 |
| H(N)CO | sample_1 | not available | conditions_1 |
| 3D-HNCO | sample_1 | not available | conditions_1 |
| 1H15N HSQC (example) | sample_1 | not available | conditions_1 |
| C(CO)NH | sample_1 | not available | conditions_1 |
Software:
No software information available
NMR spectrometers:
- Bruker DRX 600 MHz
- Varian INOVA 600 MHz
Related Database Links:
| PDB | |
| DBJ | BAG65084 |
| EMBL | CAG33345 CAG46820 |
| GB | AAB88175 AAC50312 AAH74726 AAI07778 AAI21141 |
| PRF | 2205305A |
| REF | NP_001230468 NP_001243694 NP_002180 NP_751950 XP_001145886 |
| SP | Q13261 |
Download simulated HSQC data in one of the following formats:
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SPARKY: Backbone
or all simulated shifts